.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "tutorials/ch1_fundamentals/ch1_3b_cross_sections.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_tutorials_ch1_fundamentals_ch1_3b_cross_sections.py>`
        to download the full example code

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_tutorials_ch1_fundamentals_ch1_3b_cross_sections.py:


1.3b: 2-D sections
==================

.. GENERATED FROM PYTHON SOURCE LINES 8-9

Importing

.. GENERATED FROM PYTHON SOURCE LINES 9-16

.. code-block:: Python

    import gempy as gp
    import gempy_viewer as gpv
    import numpy as np
    import matplotlib.pyplot as plt

    np.random.seed(1234)








.. GENERATED FROM PYTHON SOURCE LINES 17-20

Setup the model
---------------


.. GENERATED FROM PYTHON SOURCE LINES 22-23

Importing the data from CSV-files and setting extent and resolution

.. GENERATED FROM PYTHON SOURCE LINES 23-52

.. code-block:: Python

    data_path = 'https://raw.githubusercontent.com/cgre-aachen/gempy_data/master/'

    geo_model: gp.data.GeoModel = gp.create_geomodel(
        project_name='Tutorial_ch1_1_Basics',
        extent=[0, 2000, 0, 2000, 0, 750],
        resolution=[20, 20, 20],  # * Here we define the resolution of the voxels
        refinement=4,  # * Here we define the number of octree levels. If octree levels are defined, the resolution is ignored.
        importer_helper=gp.data.ImporterHelper(
            path_to_orientations=data_path + "/data/input_data/getting_started/simple_fault_model_orientations.csv",
            path_to_surface_points=data_path + "/data/input_data/getting_started/simple_fault_model_points.csv",
            hash_surface_points="4cdd54cd510cf345a583610585f2206a2936a05faaae05595b61febfc0191563",
            hash_orientations="7ba1de060fc8df668d411d0207a326bc94a6cdca9f5fe2ed511fd4db6b3f3526"
        )
    )

    gp.map_stack_to_surfaces(
        gempy_model=geo_model,
        mapping_object=  # TODO: This mapping I do not like it too much. We should be able to do it passing the data objects directly
        {
            "Fault_Series": 'Main_Fault',
            "Strat_Series": ('Sandstone_2', 'Siltstone', 'Shale', 'Sandstone_1')
        }
    )

    gp.set_is_fault(
        frame=geo_model.structural_frame,
        fault_groups=['Fault_Series']
    )





.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    Surface points hash:  4cdd54cd510cf345a583610585f2206a2936a05faaae05595b61febfc0191563
    Orientations hash:  7ba1de060fc8df668d411d0207a326bc94a6cdca9f5fe2ed511fd4db6b3f3526


.. raw:: html

    <div class="output_subarea output_html rendered_html output_result">

            <table>
              <tr><td>Structural Groups:</td><td>
        <table style="border-left:1.2px solid black;>
          <tr><th colspan="2"><b>StructuralGroup:</b></th></tr>
          <tr><td>Name:</td><td>Fault_Series</td></tr>
          <tr><td>Structural Relation:</td><td>StackRelationType.FAULT</td></tr>
          <tr><td>Elements:</td><td>
        <table width="50%" style="border-left:15px solid #527682;">
          <tr><th colspan="2"><b>StructuralElement:</b></th></tr>
          <tr><td>Name:</td><td>Main_Fault</td></tr>
        </table>
            </td></tr>
        </table>
            <br>
        <table style="border-left:1.2px solid black;>
          <tr><th colspan="2"><b>StructuralGroup:</b></th></tr>
          <tr><td>Name:</td><td>Strat_Series</td></tr>
          <tr><td>Structural Relation:</td><td>StackRelationType.ERODE</td></tr>
          <tr><td>Elements:</td><td>
        <table width="50%" style="border-left:15px solid #ffbe00;">
          <tr><th colspan="2"><b>StructuralElement:</b></th></tr>
          <tr><td>Name:</td><td>Sandstone_2</td></tr>
        </table>
            <br>
        <table width="50%" style="border-left:15px solid #443988;">
          <tr><th colspan="2"><b>StructuralElement:</b></th></tr>
          <tr><td>Name:</td><td>Siltstone</td></tr>
        </table>
            <br>
        <table width="50%" style="border-left:15px solid #728f02;">
          <tr><th colspan="2"><b>StructuralElement:</b></th></tr>
          <tr><td>Name:</td><td>Shale</td></tr>
        </table>
            <br>
        <table width="50%" style="border-left:15px solid #9f0052;">
          <tr><th colspan="2"><b>StructuralElement:</b></th></tr>
          <tr><td>Name:</td><td>Sandstone_1</td></tr>
        </table>
            </td></tr>
        </table>
            </td></tr>
              <tr><td>Fault Relations:</td><td><table style="border-collapse: collapse; table-layout: fixed;"><th></th><th style="transform: rotate(-35deg); height:150px; vertical-align: bottom; text-align: center;">Fault_Seri...</th><th style="transform: rotate(-35deg); height:150px; vertical-align: bottom; text-align: center;">Strat_Seri...</th><tr><th>Fault_Series</th><td style="background-color: #FFB6C1; width: 20px; height: 20px; border: 1px solid black;"></td><td style="background-color: #527682; width: 20px; height: 20px; border: 1px solid black;"></td></tr><tr><th>Strat_Series</th><td style="background-color: #FFB6C1; width: 20px; height: 20px; border: 1px solid black;"></td><td style="background-color: #FFB6C1; width: 20px; height: 20px; border: 1px solid black;"></td></tr></table></td></tr>
              <tr><td></td><td>
            <table>
              <tr>
                <td><div style="display: inline-block; background-color: #527682; width: 20px; height: 20px; border: 1px solid black;"></div> True</td>
                <td><div style="display: inline-block; background-color: #FFB6C1; width: 20px; height: 20px; border: 1px solid black;"></div> False</td>
              </tr>
            </table>
            </td></tr>
            </table>
        
    </div>
    <br />
    <br />

.. GENERATED FROM PYTHON SOURCE LINES 53-56

Add sections
~~~~~~~~~~~~


.. GENERATED FROM PYTHON SOURCE LINES 59-62

pass section dictionary with startpoint, endpoint and resolution for
every section:


.. GENERATED FROM PYTHON SOURCE LINES 64-73

.. code-block:: Python

    gp.set_section_grid(
        grid=geo_model.grid,
        section_dict={
            'section1': ([0, 0], [2000, 2000], [100, 80]),
            'section2': ([800, 0], [800, 2000], [150, 100]),
            'section3': ([0, 200], [1500, 500], [200, 150])
        }  # p1,p2,resolution
    )





.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    Active grids: ['sections']


.. raw:: html

    <div class="output_subarea output_html rendered_html output_result">
    <table border="1" class="dataframe">
      <thead>
        <tr style="text-align: right;">
          <th></th>
          <th>start</th>
          <th>stop</th>
          <th>resolution</th>
          <th>dist</th>
        </tr>
      </thead>
      <tbody>
        <tr>
          <th>section1</th>
          <td>[0, 0]</td>
          <td>[2000, 2000]</td>
          <td>[100, 80]</td>
          <td>2828.427125</td>
        </tr>
        <tr>
          <th>section2</th>
          <td>[800, 0]</td>
          <td>[800, 2000]</td>
          <td>[150, 100]</td>
          <td>2000.000000</td>
        </tr>
        <tr>
          <th>section3</th>
          <td>[0, 200]</td>
          <td>[1500, 500]</td>
          <td>[200, 150]</td>
          <td>1529.705854</td>
        </tr>
      </tbody>
    </table>
    </div>
    <br />
    <br />

.. GENERATED FROM PYTHON SOURCE LINES 74-77

Add topography
~~~~~~~~~~~~~~


.. GENERATED FROM PYTHON SOURCE LINES 79-86

.. code-block:: Python

    gp.set_topography_from_random(
        grid=geo_model.grid,
        fractal_dimension=1.2,
        d_z=np.array([300, 750]),
        topography_resolution=np.array([50, 50])
    )





.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    Active grids: ['topography' 'sections']

    <gempy.core.data.grid_modules.topography.Topography object at 0x7f088aa12350>



.. GENERATED FROM PYTHON SOURCE LINES 87-89

Active grids:


.. GENERATED FROM PYTHON SOURCE LINES 91-93

.. code-block:: Python

    geo_model.grid.active_grids_bool





.. rst-class:: sphx-glr-script-out

 .. code-block:: none


    array([False, False,  True,  True, False])



.. GENERATED FROM PYTHON SOURCE LINES 94-96

.. code-block:: Python

    gpv.plot_section_traces(geo_model)




.. image-sg:: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_001.png
   :alt: Cell Number: -1 Direction: z
   :srcset: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_001.png
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none


    <function plot_section_traces at 0x7f08fe6e30a0>



.. GENERATED FROM PYTHON SOURCE LINES 99-102

.. code-block:: Python

    geo_model.interpolation_options.mesh_extraction = False
    sol = gp.compute_model(geo_model)





.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    Setting Backend To: AvailableBackends.numpy
    /home/leguark/gempy/gempy/core/data/geo_model.py:164: UserWarning: You are using refinement and passing a regular grid. The resolution of the regular grid will be overwritten
      warnings.warn(




.. GENERATED FROM PYTHON SOURCE LINES 103-105

.. code-block:: Python

    gpv.plot_2d(geo_model, section_names=['topography'])




.. image-sg:: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_002.png
   :alt: Geological map
   :srcset: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_002.png
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    /home/leguark/gempy_viewer/gempy_viewer/API/_plot_2d_sections_api.py:106: UserWarning: Section contacts not implemented yet. We need to pass scalar field for the sections grid
      warnings.warn(

    <gempy_viewer.modules.plot_2d.visualization_2d.Plot2D object at 0x7f08f21b9330>



.. GENERATED FROM PYTHON SOURCE LINES 106-108

.. code-block:: Python

    gpv.plot_2d(geo_model, section_names=['section1'])




.. image-sg:: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_003.png
   :alt: section1
   :srcset: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_003.png
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    /home/leguark/gempy_viewer/gempy_viewer/API/_plot_2d_sections_api.py:106: UserWarning: Section contacts not implemented yet. We need to pass scalar field for the sections grid
      warnings.warn(

    <gempy_viewer.modules.plot_2d.visualization_2d.Plot2D object at 0x7f08f21bb220>



.. GENERATED FROM PYTHON SOURCE LINES 109-117

.. code-block:: Python

    gpv.plot_2d(
        model=geo_model,
        section_names=['section1', 'section2', 'section3', 'topography'],
        show_topography=True
    )


    # sphinx_gallery_thumbnail_number = 4



.. image-sg:: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_004.png
   :alt: section1, section2, section3, Geological map
   :srcset: /tutorials/ch1_fundamentals/images/sphx_glr_ch1_3b_cross_sections_004.png
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none

    /home/leguark/gempy_viewer/gempy_viewer/API/_plot_2d_sections_api.py:106: UserWarning: Section contacts not implemented yet. We need to pass scalar field for the sections grid
      warnings.warn(
    /home/leguark/gempy_viewer/gempy_viewer/API/_plot_2d_sections_api.py:106: UserWarning: Section contacts not implemented yet. We need to pass scalar field for the sections grid
      warnings.warn(

    <gempy_viewer.modules.plot_2d.visualization_2d.Plot2D object at 0x7f08f51b72b0>




.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 3.974 seconds)


.. _sphx_glr_download_tutorials_ch1_fundamentals_ch1_3b_cross_sections.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: ch1_3b_cross_sections.ipynb <ch1_3b_cross_sections.ipynb>`

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: ch1_3b_cross_sections.py <ch1_3b_cross_sections.py>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_